FacileData: A fluent API for accessing multi-assay high-throughput genomics data

Defines the "FacileData" API over multi-assay, high-throughput genomics data. The FacileData API is a fluent tidy-like grammar that facilitates exploratory data analysis. This package also defines a "FacileDataSet" class, which is a reference implementation of the "FacileData" API that uses SQLite and HDF5 files to store arbitrarily large datasets and provide fast and efficient access to arbitrary subsets of these data without loading it all into memory.

See also

Useful links:

• https://github.com/facilebio/FacileData

• Report bugs at https://github.com/facilebio/FacileData/issues

Author

Maintainer: Steve Lianoglou lianoglou@dnli.com (ORCID)

Authors:

• Vincent Rouilly rouilly.vincent@gene.com

• Peter Haverty (@phaverty on github)

Other contributors:

• Jonathan Carrol jono@jcarroll.com.au [contributor]

• Denali Therapeutics (Coypright 2019) [copyright holder, funder]

• Genentech (Coypright 2016 - 2018) [copyright holder, funder]