Note that this function will force the collection of x

fetch_sample_covariates(
  x,
  samples = NULL,
  covariates = NULL,
  custom_key = Sys.getenv("USER"),
  with_source = FALSE,
  ...
)

with_sample_covariates(
  x,
  covariates = NULL,
  na.rm = FALSE,
  custom_key = Sys.getenv("USER"),
  .fds = NULL,
  ...
)

# S3 method for FacileDataSet
fetch_sample_covariates(
  x,
  samples = NULL,
  covariates = NULL,
  custom_key = Sys.getenv("USER"),
  with_source = FALSE,
  ...
)

# S3 method for facile_frame
fetch_sample_covariates(
  x,
  samples = NULL,
  covariates = NULL,
  custom_key = Sys.getenv("USER"),
  with_source = FALSE,
  ...
)

Arguments

x

a FacileDataSet connection

samples

a samples descriptor tbl_*

covariates

character vector of covariate names

custom_key

The key to use to fetch more custom annotations over the given samples

na.rm

if TRUE, filters outgoing result such that only rows with nonNA values for the covariates specified here will be returned. Default: FALSE. Note that this will not check columns not specified in covariates for NA-ness.

.fds

A FacileDataSet object

Value

The facile x object, annotated with the specified covariates.

rows from the sample_covariate table

See also